Summary

Imputation

This notebook aims to impute some missing data and enrich the dataset.

February 19, 2024 | 10:03:25 +01:00

Raphael Saldanha

Missing data analysis

This report presents a missing data analysis from the raw parquet files.

February 19, 2024 | 10:02:22 +01:00

Raphael Saldanha

Case classification analysis

This is a descriptive report about dengue case classification and criteria.

February 19, 2024 | 10:01:36 +01:00

Raphael Saldanha

Datasets

February 19, 2024 | 09:59:55 +01:00

Raphael Saldanha

Export aggregated database

This notebook aims to create a database with aggregated counts of positive dengue cases for spatial and time units.

February 19, 2024 | 09:43:37 +01:00

Raphael Saldanha

Model simplified reference dataset

On this notebook, models are trained and tested based on the simplified version of the reference dataset.

February 19, 2024 | 08:54:53 +01:00

Raphael Saldanha

Datasets

February 15, 2024 | 17:19:43 +01:00

Raphael Saldanha

Exploratory Data Analysis

Variable type: character

February 8, 2024 | 11:57:38 +01:00

Raphael Saldanha

Dengue case classification

by symptoms and clinical condition

The objective of this notebook is to train a model to…

February 8, 2024 | 10:54:45 +01:00

Raphael Saldanha

Raw files, chikungunya

This notebook presents the process of downloading SINAN Dengue raw data files from DataSUS, pre-processing steps using the {microdatasus} …

February 6, 2024 | 13:09:47 +01:00

Raphael Saldanha

Raw files, chikungunya

This notebook presents the process of downloading SINAN Dengue raw data files from DataSUS, pre-processing steps using the {microdatasus} …

February 5, 2024 | 15:52:12 +01:00

Raphael Saldanha

Cases and climate variables multivariate clustering

This notebook aims to cluster the Brazilian municipalities considering climate indicators with multivariate clustering techniques.

February 5, 2024 | 15:39:06 +01:00

Raphael Saldanha

Multivariate clustering, all data model

This notebooks aims to reproduce the methodology of the paper submitted to the SBD2023 conference, implementing the global and subset modelling with a multivariate approach.

February 1, 2024 | 09:05:51 +01:00

Raphael Saldanha

Denque and weather lags

This notebook…

January 25, 2024 | 15:18:06 +01:00

Raphael Saldanha

Raw files

This notebook presents the process of downloading SINAN Dengue raw data files from DataSUS, pre-processing steps using the {microdatasus} …

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Time series features

with scaled cases

This notebook aims to explore time series features of dengue cases that may guide the clustering procedures. Time series features descriptions are quoted from Hyndman et al. (202…

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Scaled cases

This notebook aims to cluster the Brazilian municipalities considering scaled (standardized) dengue cases time-series similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Scaled cases, cumulative

This notebook aims to cluster the Brazilian municipalities considering scaled (standardized) dengue cases time-series similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

SDTW, cumulative and scaled long time series

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Raw cases, cumulative

This notebook aims to cluster the Brazilian municipalities considering dengue raw cases time-series similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Cumulative time series

This notebook aims to cluster the Brazilian municipalities cumulative yearly dengue cases time-series yearly by its similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Climate variables multivariate clustering

This notebook aims to cluster the Brazilian municipalities considering only climate indicators with multivariate clustering techniques.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Raw cases

This notebook aims to cluster the Brazilian municipalities considering dengue raw cases time-series similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Yearly time series

This notebook aims to cluster the Brazilian municipalities considering yearly dengue cases time-series similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Epi year time series

This notebook aims to cluster the Brazilian municipalities by epidemiological yearly dengue cases time-series yearly (starting on September) by its similarities.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Hierarchical clustering

with scaled cases

This notebooks aims to explore hierarchical clustering of municipalities considering scaled dengue cases time series.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Time series features clustering

This notebooks aims to implement the global and subset modelling, adopting a clustering strategy based on time series features extraction, with the {tsfeatures} package.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

SBD clustering

This notebooks aims to reproduce the metodology of the paper submitted to the SBD2023 conference, implementing the global and subset modelling.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Regression task

This notebook models the relationship between dengue cases and weather variables using the nominal value of dengue cases.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Dengue case classification

by symptoms and clinical condition

The objective of this notebook is to predict a dengue suspected case based on its symptoms, clinical conditions and other patient related variables.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Classification task

This notebook models the relationship between dengue cases and weather variables using a classification of dengue cases as outbreak level (anomaly) or base level.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Time series features clustering, with robust sparse k-means

This notebooks aims to implement the global and subset modelling, adopting a clustering strategy based on time series features extraction, with the {tsfeatures} package.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Multivariate clustering, climate model

This notebooks aims to reproduce the methodology of the paper submitted to the SBD2023 conference, implementing the global and subset modelling with a multivariate approach.

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha

Global and subset models workflow

December 1, 2023 | 09:07:18 +01:00

Raphael Saldanha